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Author Archives: Tadashi Imanishi

Our new paper about VaDE database published

November 7th, 2014 | Posted by Tadashi Imanishi in Database | Paper - (Comments Off on Our new paper about VaDE database published)

Our new paper about VaDE database was published in Nucleic Acids Research.

Nagai Y†, Takahashi Y†, and Imanishi T* (2014) VaDE: a manually-curated database of reproducible associations between various traits and human genomic polymorphisms. Nucleic Acids Research, Database Issue 2014;43(Database issue):D868-72. doi: 10.1093/nar/gku1037.

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Medical School Students Visited Our Laboratory

September 6th, 2014 | Posted by Tadashi Imanishi in News - (Comments Off on Medical School Students Visited Our Laboratory)

Four students of Tokai University School of Medicine visited our laboratory for a week to experience basic research activities. They joined the journal club, and analyzed personal genome sequences using computers.

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VaDE version 1.3 was released.

August 26th, 2014 | Posted by Tadashi Imanishi in Database - (Comments Off on VaDE version 1.3 was released.)

A new version of VaDE database was released.

  • Added association data for type 2 diabetes based on manual curation
  • Counted the correct number of statistically significant studies in each paper
  • Altered the way of reproducibility assessment based on significant studies

URL: http://bmi-tokai.jp/VaDE